tcga_metadata_processing module¶

tcga_metadata_processing.parse_tcga_json_files(files)[source]¶

Read json files from list and extract relevant values

Parameters: files – list of files
Returns: metadata dictionary

tcga_metadata_processing.write_tcga_table(outpath, metadata)[source]¶

Write metadata to table

Parameters

outpath – to metadata_table .csv
metadata – dict